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This function finds the shared source_mat_ids between the source_data and sample_data, and sample_ids between the sample_data and feature_data objects. It also reports any ids that are unique to each object.

If passing a qsip_data object as the first argument, no other arguments are necessary. If a qsip_source_data is given, then the sample_data and feature_data objects must be given as well.

Additionally, the results of get_shared_ids() might be obtained from the @shared slot of a qsip_data object. This data can also be "pretty printed" using the get_unshared_ids(<qsip_data>) function.

Usage

get_shared_ids(source_data, sample_data = NULL, feature_data = NULL)

Arguments

source_data

(qsip_source_data or qsip_data) A qSIP object with source data object

sample_data

(qsip_sample_data) A qSIP sample data object

feature_data

(qsip_feature_data) A qSIP feature data object

Value

A list with two lists, one for source_mat_ids and one for sample_ids.