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Convert an orthogroup list dataframe to a count dataframe

Source: R/orthofinder.R
orthogroup_list2counts.Rd

This function is used to convert the output of read_orthogroups() when the type is set to "list" to a count format. Alternatively, it can run in verify mode where it will return "counts" or "list" based on some basic inference.

Usage

orthogroup_list2counts(orthogroups, verify = F)

Arguments

orthogroups

The orthogroup dataframe

verify

If TRUE, return "counts" or "list" based on the input