Calculate Total and Pairwise Adonis Values

Calculate Total and Pairwise Adonis Values

Usage

pairwiseAdonis(x, factors, sim.method = "bray", p.adjust.m = "BH", perm = 999)

Arguments

x

A dataframe of values with samples in columns, and observations in rows

factors

A dataframe with samples to be compared as rownames, and the groupings as column 1. It is easy to get this with a "select()" statement.

sim.method

The distance method

p.adjust.m

P-value adjustment method

perm

= Number of permutations